WHAM tutorial

These vignettes provide an introduction to fitting state-space assessment models using the WHAM package. They get progressively more complex, so we advise working through them in order unless you are only interested in a specific topic.

Ex 1: The basics
Ex 2: Recruitment linked to an environmental covariate (Cold Pool Index)
Ex 3: Projecting / forecasting random effects
Ex 4: Selectivity with time- and age-varying random effects
Ex 5: Time-varying natural mortality linked to the Gulf Stream Index
Ex 6: Numbers-at-age / survival deviations as random effects